How-to build DSI Studio for Ubuntu 18.04 and later

DSI Studio is an open-source diffusion MRI analysis tool. We need to compile the software for Linux.
I could successfully finish compile the DSI Studio for Ubuntu 18.04 and later. Below is what I did.

  • 18-May-2021 Update instruction for Ubuntu 20.04. You need to install g++-7 and gcc-7 for compile.
  • 08-May-2021 Ubuntu 20.04 has Qt5.12.8 as default, so it would be easy. For Ubuntu 18.04, I found PPA for Qt5.12.8, which would make the installation much easier, so I updated the instruction.
  • 21-Mar-2020 Now DSI studio needs Qt 5.12.x for compile. I added the explanation how to setup Qt 5.12.
  1. Install gcc and g++
    • Ubuntu 20.04
    • DSI Studio needs gcc-7 and g++-7 for compile on Ubuntu 20.04. We can install them via apt.

      sudo apt update
      sudo apt install g++-7
      

      Just installing gcc-7 and g++-7 won’t have any effects on the machine.
      You can check the version of gcc and g++ by typing gcc –version and g++ –version

      gcc --version
          gcc (Ubuntu 9.3.0-17ubuntu1~20.04) 9.3.0
      
      g++ --version
          g++ (Ubuntu 9.3.0-17ubuntu1~20.04) 9.3.0
      

      In order to make gcc-7 and g++-7 available, we need to do the following;

      sudo update-alternatives --install /usr/bin/gcc gcc /usr/bin/gcc-7 10
      sudo update-alternatives --install /usr/bin/g++ g++ /usr/bin/g++-7 10
      

      You should see something like;

      update-alternatives: using /usr/bin/g++-7 to provide /usr/bin/g++ (g++) in auto mode
      

      If you have installed other version of gcc (eg. gcc-10), You need to select gcc-7 and g++-7

      sudo update-alternatives --config gcc
      
      There are 2 choices for the alternative gcc (providing /usr/bin/gcc).
      
        Selection    Path            Priority   Status
      ------------------------------------------------------------
        0            /usr/bin/gcc-7   10        auto mode
        1            /usr/bin/gcc-7   10        manual mode
      * 2            /usr/bin/gcc-9   20        manual mode
      
      Press <enter> to keep the current choice[*], or type selection number: 0
      

      Do the same thing for g++

      sudo update-alternatives --config g++
      
    • Ubuntu 18.04
    • DSI Studio needs gcc-7 and g++-7 for compile on Ubuntu 18.04. We can install them via apt.

      sudo apt install g++-7
      
  2. Install necessary files for compile
  3. We also need to install the following;

    sudo apt install git libboost-all-dev zlib1g zlib1g-dev
    
  4. Get Qt 5.12.8
    • For Ubuntu 20.04, default Qt5 should work.
    • sudo apt install qt5-qmake qt5-default libqt5charts5-dev
      

      Some may need to install libqt5opengl5-dev (Thank Steven Baete for the Feedback!)

      sudo apt install libqt5opengl5-dev
      
    • For Ubuntu 18.04, PPA provided by Stephan Binner would be helpful.
    • sudo add-apt-repository ppa:beineri/opt-qt-5.12.8-bionic
      sudo apt update
      sudo apt install qt512base qt512charts-no-lgpl
      source /opt/qt512/bin/qt512-env.sh
      

  5. Prepare a working directory
  6. Prepare a working directory. We save files in this directory.

    mkdir dsistudio
    
  7. Get the Windows version of DSI Studio
  8. Download the Windows version of DSI Studio from this link and save it under working directory (dsistudio).
    Filename should be “dsi_studio_win.zip.”

  9. Get the source code from GitHub
  10. Now we get the source code of DSI Studio from Github. We also need “frankyeh-TIPL-xxxxxx(revision number).zip” to be downloaded. After unzipping, rename the folder as “tipl”, and move under src.

    cd dsistudio
    git clone -b master git://github.com/frankyeh/DSI-Studio.git src
    xdg-open https://github.com/frankyeh/TIPL/zipball/master
    unzip frankyeh-TIPL-xxxxxxx.zip
    mv frankyeh-TIPL-xxxxxxx tipl
    mv tipl src
    
  11. Compile
  12. Prepare a directory for build and compile. The point is that we need to use qmake under Qt5.12.8. I chose to specify fullpath because I don’t have to tweak system environments. After executing qmake, we just run make to compile.

    mkdir build
    cd build
    
    #(for Ubuntu 20.04)
    qmake ../src
    
    #(for Ubuntu 18.04 using ppa by Stephan Binner)
    /opt/qt512/bin/qmake ../src
    
    make
    

    If it goes well, you should find dsi_studio under build directory.
    You may remove unnecessary files with make clean.

    make clean
    
  13. Packaging
  14. Windows version zip file has atlas and other files included. We make use of it.
    DLL files are for Windows, so we delete all of them.

    cd .. # Now you should be in the "dsistudio" directory
    unzip dsi_studio_win.zip
    cd dsi_studio_win
    find . -name '*.dll' -exec rm {} ;
    rmdir iconengines imageformats platforms styles 
    rm dsi_studio.exe
    cp ../build/dsi_studio .
    
  15. Run DSI Studio
  16. Now you can run DSI Studio from the terminal.

    ./dsi_studio
    

    If everything works, the command brings up DSI Studio.

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49 thoughts on “How-to build DSI Studio for Ubuntu 18.04 and later

  1. Dear Kiyotaka,
    Sorry to interrupt you. I was stuck at step 5. “Download the Windows version of DSI Studio from this link and save it under working directory (dsistudio).”
    Does this mean “dsi_studio_win.zip(github)”? “this link” is now out of date. I did not understand where to save the downloaded files. Where is the directory of “dsistudio”?
    Yasuhisa Sakurai

      • Dear Kiyotaka,
        Thank you for your kind reply. I have known that DSI Studio has a Windows version. I downloaded the win.zip file from the official site and installed the application successfully.
        Yasuhisa Sakurai

  2. Dear Kiyotaka,

    Thank for you for this detailed post! I’m using ubuntu 20.04, and after following your detailed instructions, and typed in make, I got the following error:

    /usr/lib/qt5/bin/uic ../src/mainwindow.ui -o ui_mainwindow.h
    /usr/lib/qt5/bin/uic ../src/tracking/tracking_window.ui -o ui_tracking_window.h
    /usr/lib/qt5/bin/uic ../src/reconstruction/reconstruction_window.ui -o ui_reconstruction_window.h
    /usr/lib/qt5/bin/uic ../src/dicom/dicom_parser.ui -o ui_dicom_parser.h
    /usr/lib/qt5/bin/uic ../src/view_image.ui -o ui_view_image.h
    /usr/lib/qt5/bin/uic ../src/manual_alignment.ui -o ui_manual_alignment.h
    /usr/lib/qt5/bin/uic ../src/tracking/tract_report.ui -o ui_tract_report.h
    /usr/lib/qt5/bin/uic ../src/tracking/color_bar_dialog.ui -o ui_color_bar_dialog.h
    /usr/lib/qt5/bin/uic ../src/tracking/connectivity_matrix_dialog.ui -o ui_connectivity_matrix_dialog.h
    /usr/lib/qt5/bin/uic ../src/tracking/atlasdialog.ui -o ui_atlasdialog.h
    /usr/lib/qt5/bin/uic ../src/filebrowser.ui -o ui_filebrowser.h
    /usr/lib/qt5/bin/uic ../src/connectometry/createdbdialog.ui -o ui_createdbdialog.h
    /usr/lib/qt5/bin/uic ../src/connectometry/individual_connectometry.ui -o ui_individual_connectometry.h
    /usr/lib/qt5/bin/uic ../src/connectometry/match_db.ui -o ui_match_db.h
    /usr/lib/qt5/bin/uic ../src/connectometry/db_window.ui -o ui_db_window.h
    /usr/lib/qt5/bin/uic ../src/connectometry/group_connectometry.ui -o ui_group_connectometry.h
    /usr/lib/qt5/bin/uic ../src/regtoolbox.ui -o ui_regtoolbox.h
    /usr/lib/qt5/bin/uic ../src/connectometry/nn_connectometry.ui -o ui_nn_connectometry.h
    /usr/lib/qt5/bin/uic ../src/auto_track.ui -o ui_auto_track.h
    g++ -c -pipe -fpermissive -Wno-sign-compare -O2 -std=gnu++1z -Wall -W -D_REENTRANT -fPIC -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_CHARTS_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_CORE_LIB -I../src -I. -I./plot -I../src/libs -I../src/libs/dsi -I../src/libs/tracking -I../src/libs/mapping -I../src/dicom -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtCharts -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I. -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -o main.o ../src/main.cpp
    g++ -c -pipe -fpermissive -Wno-sign-compare -O2 -std=gnu++1z -Wall -W -D_REENTRANT -fPIC -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_CHARTS_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_CORE_LIB -I../src -I. -I./plot -I../src/libs -I../src/libs/dsi -I../src/libs/tracking -I../src/libs/mapping -I../src/dicom -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtCharts -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I. -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -o mainwindow.o ../src/mainwindow.cpp
    In file included from ../src/mainwindow.cpp:1:0:
    ../src/mac_filesystem.hpp:7:10: fatal error: filesystem: No such file or directory
    #include
    ^~~~~~~~~~~~
    compilation terminated.
    make: *** [Makefile:2375: mainwindow.o] Error 1

    Could you advise on how to resolve this issue? Thanks so much!
    Catherine

    • Dear Catherine,

      I will look into the error to resolve the problem.
      For the time being, below is the link for the compiled DSI Studio for Ubuntu 20.04 (I myself compiled under Ubuntu 20.04 on 17 Jun 2021). Could you download and try it? Unzip dsistudio2004.zip and you will see the dsistudio directory. From the terminal, please run `./dsi_studio` It should work without any problem.

      http://www.lin4neuro.net/lin4neuro/neuroimaging_software_packages/dsistudio2004.zip

      Best regards,

      Kiyotaka

      • Dear Kiyotaka,

        Many thanks for the link and a swift response! Now it works perfectly. But please do let me know if you figured out what might go wrong with my compilations.

        Best,
        Catherine

  3. Hello,

    thanks for the excellent tutorial! I have followed all the instructions precisely. I am trying to build on Ubuntu 20.04, but receive an error during build for the RegionModel.h file. The error is as follows:

    In file included from ../src/tipl/tipl.hpp:85,
    from ../src/tracking/region/RegionModel.h:7,
    from ../src/tracking/region/RegionModel.cpp:6:
    ../src/tipl/vis/march_cube.hpp: In instantiation of ‘tipl::march_cube::march_cube(const ImageType&, double) [with ImageType = tipl::image; VectorType = tipl::vector]’:
    ../src/tracking/region/RegionModel.cpp:101:73: required from here
    ../src/tipl/vis/march_cube.hpp:443:57: error: ‘class image_type::value_type’ resolves to ‘tipl::image::value_type’ {aka ‘unsigned char’}, which is is not a class type
    443 | std::vector pixels;
    | ^~~~~~
    ../src/tipl/vis/march_cube.hpp:443:57: error: ‘class image_type::value_type’ resolves to ‘tipl::image::value_type’ {aka ‘unsigned char’}, which is is not a class type
    In file included from ../src/tipl/numerical/basic_op.hpp:6,
    from ../src/tipl/morphology/morphology.hpp:7,
    from ../src/tipl/tipl.hpp:32,
    from ../src/tracking/region/RegionModel.h:7,
    from ../src/tracking/region/RegionModel.cpp:6:
    ../src/tipl/utility/multi_thread.hpp: In instantiation of ‘void tipl::par_for(T, Func, int) [with T = long unsigned int; Func = RegionModel::load(const std::vector<tipl::vector >&, double, unsigned char)::]’:
    ../src/tracking/region/RegionModel.cpp:118:6: required from here
    ../src/tipl/utility/multi_thread.hpp:25:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
    25 | if(thread_count > size)
    | ~~~~~~~~~~~~~^~~~~~
    In file included from ../src/tipl/tipl.hpp:85,
    from ../src/tracking/region/RegionModel.h:7,
    from ../src/tracking/region/RegionModel.cpp:6:
    ../src/tipl/vis/march_cube.hpp: In instantiation of ‘tipl::march_cube::march_cube(const ImageType&, double) [with ImageType = tipl::image; VectorType = tipl::vector]’:
    ../src/tracking/region/RegionModel.cpp:154:27: required from here
    ../src/tipl/vis/march_cube.hpp:443:57: error: ‘class image_type::value_type’ resolves to ‘tipl::image::value_type’ {aka ‘float’}, which is is not a class type
    443 | std::vector pixels;
    | ^~~~~~
    ../src/tipl/vis/march_cube.hpp:443:57: error: ‘class image_type::value_type’ resolves to ‘tipl::image::value_type’ {aka ‘float’}, which is is not a class type
    In file included from ../src/tipl/morphology/morphology.hpp:7,
    from ../src/tipl/tipl.hpp:32,
    from ../src/tracking/region/RegionModel.h:7,
    from ../src/tracking/region/RegionModel.cpp:6:

    Any idea how to fix this?

    Thanks!
    Johannes

    • Hi Johannes,

      I usually use Ubuntu 18.04 and I have not tried Ubuntu 20.04 much.
      So please give me time to replicate the issue.
      (It works for Ubuntu 18.04 for sure.)

      Best regards,

      Kiyotaka

    • Hi Johannes,

      I compiled DSI studio on Ubuntu 20.04 and found out that gcc-10 won’t work well. gcc-7 as well as g++-7 work well.

      I updated the article, so please check it and see how it works.

      • Hello Kiyotaka,

        thank you for the quick help. Using gcc 7 did the trick! I noticed there is now a small typo in your tutorial. It should be libqt5charts5-dev instead of libqt5chart5-dev in step 3.

        Once again, thanks so much for the quick help. Really appreciate it!

        Johannes

        • Hi Johannes,

          Glad to know that it worked for you. Also, thank you for finding the typo. It’s fixed now!

          Kiyotaka

    • Hello,

      I’m also working with Ubuntu 20.04 installation of DSI Studio and ran into the same error. I believe you can fix yours by following the instructions here: https://github.com/frankyeh/TIPL/issues/9. Essentially this will entail you changing:
      line#443 in dsistudio/src/tipl/vis/march_cube.hpp
      std::vector pixels; to
      std::vector pixels;

      However, I’m running into another issue in which the ‘make’ command isn’t working correctly because we’ve installed Qt 5.12.8 (as per Step 3.) instead of the required 5.12.2 for DSI Study to function.

      Perhaps we need to update the tutorial above to reflect an installation to Qt 5.12.2.

      • Hi Tyler,

        Thank you for the info.
        I didn’t have any problems compiling DSI studio with Qt5.12.8, so I’m curious what kind of error you got with 5.12.8. Could you tell me what error you got with `make`?
        Ubuntu 20.04 ships with Qt5.12.8, so I hope DSI studio can be compiled without any problems with Qt5.12.8

        As I replied to Johannes, gcc and g++ versions also matter.
        Which version of gcc and g++ did you use?

        Best regards,

        Kiyotaka

        • Hi Kiyotaka,

          I’m using the following versions of gcc and g++ in Ubuntu 20.04:
          gcc –version –> gcc (Ubuntu 7.5.0-6ubuntu2) 7.5.0
          g++ –version –> g++ (Ubuntu 7.5.0-6ubuntu2) 7.5.0

          Frank Yeh (Google Group Thread: https://groups.google.com/u/3/g/dsi-studio/c/x1uUvdJYsZc) pointed out that this line could be causing the errors and that it was likely due to me using Qt5.12.8 instead of the intended Qt5.12.2:
          ./ui_group_connectometry.h: In member function ‘void
          Ui_group_connectometry::setupUi(QDialog*)’:
          ./ui_group_connectometry.h:308:24: error: ‘class QListWidget’ has no
          member named ‘setItemAlignment’; did you mean ‘setItemWidget’?

          That’s really interesting that you were able to compile with Qt5.12.8, I wonder what the issue could be.. I posted the full error message in a .txt file at the Google Group Thread I linked above, if you think it may help.

          Thanks,
          Tyler

          • Hi Tyler,

            Thanks. I use Qt5.12.8 to compile DSI Studio for both Ubuntu 18.04 and 21.04 and it has worked well so far.
            I will look into the thread.

            Kiyotaka

          • I think the issue may be that Anaconda is restricting the qt5 package to 5.9.7, so I’m going to see if I can just learn to deploy this on a Singularity container. Thanks for your help, hope this thread can help others too.

          • Hi Tyler,

            That makes sense. Thank you for the info.

            Best regards,

            Kiyotaka

          • I also tested Ubuntu 20.04 using docker container and Kiyotaka’s instruction works without a problem. It seems to me that the error related to is due to a different Qt version, and I would remove existing Qt and re-install to see if it works.

          • Hi Frank,

            Thank you very much for your validation!

            Best regards,

            Kiyotaka

  4. Hi

    My name is Sumiko. Thank you so much for the instruction, I have been successful to build dsi_studio on my new Dell workstation Precision 7920.
    Everything works fine till I try to open the fib.gz file. dsi_studio faults with error:
    ===========================
    load fib
    Segmentation fault (core dumped)
    ===========================

    My Ubuntu version is 18.04, OpenGL is 4.6.0, the graphic card is NVIDIA Quadro RTX 5000, graphic card driver version is 410.78.

    Any ideas about this problem?

    Thank you in advance. Sumiko

    • Dear Sumiko,

      Thank you for the question.
      Right now I have no clue about this problem.
      It might be better to ask Frank, the developer of DSI studio about this problem.

      Best regrads,

      Kiyotaka

  5. Hi,

    Thank you so much for the instruction.

    I followed the instruction and built dsi_studio successfully. Everything worked well until I run the “Step 3: Fiber tracking”. I am able to generate *.src.gz and *.fib.gz files. When I load the fiber file in step 3, dsi_studio are fault with core dump segmentation error.

    Any suggestion? For your referal, my Utunbu version is Ubuntu 18.04 LTS, and qt version is 5.12.8. Any advice would be great appreciated.
    Thank you,

    Sumiko

  6. Thank you for the instruction.

    I tried to install DSIsutio on Ubuntu 18.04 with the latest tipl files, but faced the error:

    Makefile:5193: recipe for target ‘group_connectometry.o’ failed
    make: *** [group_connectometry.o] Error 1

    • Hi,

      I revised the article and added an explanation how to use Qt 5.12 for compilation of DSI Studio.

      Hope this helps,

  7. Thank you for this great article.

    I am trying to install DSI-studio on my Ubuntu 18.04 system and running into an error after step 7:

    $ qmake ../src
    Project ERROR: Unknown module(s) in QT: charts

    How could I work around it?

    I would appreciate any help you may provide.

    Luis

    • Dear Luis,

      Sorry, your comment on 20 March was recognized as spam, and I just noticed your comment.

      I myself use Ubuntu core + XFCE, so please give me a few days to look for the workaround in (standard) Ubuntu.

      For the time being, my compiled version may work.
      If you are interested, please download the following link and see how it works.

      http://www.lin4neuro.net/lin4neuro/neuroimaging_software_packages/dsistudio1804.zip

      Best regards,

      Kiyotaka

      • Dear Luis

        I found the workaround.

        Please install libqt5charts5-dev

        sudo apt install libqt5charts5-dev
        

        However, I had compilation error after that.
        I will look for the workaround for this problem.

        Best,

        Kiyotaka

        • Dear Kiyotaka,

          Thank you for the quick response. I appreciate you looking into this compile error on Ubuntu 18.04.

          I tried step 7 after installing libqt5charts5-dev and I still got the charts error:

          $ qmake ../src
          Project ERROR: Unknown module(s) in QT: charts

          I would look into your compiled version in the meanwhile.

          Thank you,

          Luis

          • Dear Luis,

            Hmm… In my circumstance with original Ubuntu 18.04, installing libqt5charts5-dev solved the problem…
            I will look for another workaround. It may take some time.
            Please check the compiled version for the time being.

            Best,

            Kiyotaka

          • Dear Luis,

            It took for a while, but I finally found out how to compile DSI studio with Qt5.12.
            I updated the article, so please give it a try.

            Best regards,

            Kiyotaka

  8. Hello,

    I am doing a fresh install of DSI and have not been able to get it to compile without an error. The error that I currently have and cannot figure out is as follows:

    Makefile:4936: recipe for target ‘connectometry_db.o’ failed
    make: *** [connectometry_db.o] Error 1

    There was no other information regarding why this failed.

    I am running Ubuntu 16.04

    Any information would be helpful

  9. Hi,

    When I check gcc version, it returned:

    gcc (Ubuntu 5.4.0-6ubuntu1~16.04.9) 5.4.0 20160609
    g++ (Ubuntu 5.4.0-6ubuntu1~16.04.9) 5.4.0 20160609

    So I skipped step 1. and step 2.

    But ‘make’ returned this error:

    /usr/lib/x86_64-linux-gnu/qt5/bin/uic ../src/mainwindow.ui -o ui_mainwindow.h
    /usr/lib/x86_64-linux-gnu/qt5/bin/uic ../src/tracking/tracking_window.ui -o ui_tracking_window.h
    /usr/lib/x86_64-linux-gnu/qt5/bin/uic ../src/reconstruction/reconstruction_window.ui -o ui_reconstruction_window.h
    /usr/lib/x86_64-linux-gnu/qt5/bin/uic ../src/dicom/dicom_parser.ui -o ui_dicom_parser.h
    /usr/lib/x86_64-linux-gnu/qt5/bin/uic ../src/simulation.ui -o ui_simulation.h
    /usr/lib/x86_64-linux-gnu/qt5/bin/uic ../src/view_image.ui -o ui_view_image.h
    /usr/lib/x86_64-linux-gnu/qt5/bin/uic ../src/manual_alignment.ui -o ui_manual_alignment.h
    /usr/lib/x86_64-linux-gnu/qt5/bin/uic ../src/tracking/tract_report.ui -o ui_tract_report.h
    /usr/lib/x86_64-linux-gnu/qt5/bin/uic ../src/tracking/color_bar_dialog.ui -o ui_color_bar_dialog.h
    ../src/tracking/color_bar_dialog.ui: Warning: Z-order assignment: ” is not a valid widget.
    /usr/lib/x86_64-linux-gnu/qt5/bin/uic ../src/tracking/connectivity_matrix_dialog.ui -o ui_connectivity_matrix_dialog.h
    /usr/lib/x86_64-linux-gnu/qt5/bin/uic ../src/tracking/atlasdialog.ui -o ui_atlasdialog.h
    /usr/lib/x86_64-linux-gnu/qt5/bin/uic ../src/dicom/motion_dialog.ui -o ui_motion_dialog.h
    /usr/lib/x86_64-linux-gnu/qt5/bin/uic ../src/filebrowser.ui -o ui_filebrowser.h
    ../src/filebrowser.ui: Warning: The name ‘layoutWidget’ (QWidget) is already in use, defaulting to ‘layoutWidget1’.
    /usr/lib/x86_64-linux-gnu/qt5/bin/uic ../src/connectometry/createdbdialog.ui -o ui_createdbdialog.h
    /usr/lib/x86_64-linux-gnu/qt5/bin/uic ../src/connectometry/individual_connectometry.ui -o ui_individual_connectometry.h
    /usr/lib/x86_64-linux-gnu/qt5/bin/uic ../src/connectometry/match_db.ui -o ui_match_db.h
    /usr/lib/x86_64-linux-gnu/qt5/bin/uic ../src/connectometry/db_window.ui -o ui_db_window.h
    /usr/lib/x86_64-linux-gnu/qt5/bin/uic ../src/connectometry/group_connectometry.ui -o ui_group_connectometry.h
    /usr/lib/x86_64-linux-gnu/qt5/bin/uic ../src/regtoolbox.ui -o ui_regtoolbox.h
    g++ -c -m64 -pipe -fpermissive -O2 -std=c++0x -Wall -W -D_REENTRANT -fPIC -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_CORE_LIB -I../src -I. -I../src/libs -I../src/libs/dsi -I../src/libs/tracking -I../src/libs/mapping -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtPrintSupport -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I. -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++-64 -o main.o ../src/main.cpp
    In file included from ../src/mainwindow.h:6:0,
    from ../src/main.cpp:9:
    ../src/libs/vbc/vbc_database.h:5:25: fatal error: tipl/tipl.hpp: No such file or directory
    compilation terminated.
    Makefile:887: recipe for target ‘main.o’ failed
    make: *** [main.o] Error 1

    Thank you
    2086

    • Hi,

      I came across the similar error before. In my case, it was due to the wrong version of TILP-master.

      Please make sure you download the latest version of TILP-master.

      Other than that, please ask Frank Yeh, the developer of DSI studio.

  10. Hello,

    I have a new problem now. When I type ./dsistudio in the build directory. It shows up an Error window [Failed to load template file at]. Do you know how to solve this error message?

    • Dear Po-yu,

      Did you download windows version of DSI-Studio? Template files should be in there.

  11. Dear Frank and Kiyotoka,

    I am trying to compile DSI studio in my Ubuntu 16.04 but I encounter a problem on step 7 “qmake ../src”

    ~/dsistudio/build$ qmake ../src
    Could not find qmake configuration file linux-g++.
    Error processing project file: ../src/dsi_studio.pro

    I tried to find the answers on the Internet but these answers do not work for me.

    Please guide me to install your software.

    Thanks,
    Po-Yu

    • Dear Po-Yu,

      The error message indicates that you have problems with qmake.

      Could you tell me the result of the following command?

      $ qmake –version

      Best regards,

      Kiyotaka

      • pkao@Formosa:~$ qmake -version
        QMake version 3.0
        Using Qt version 5.6.2 in /home/pkao/anaconda2/bin/lib

        • Dear Po-Yu,

          In my circumstance,

          $ qmake –version
          QMake version 3.0
          Using Qt version 5.5.1 in /usr/lib/x86_64-linux-gnu

          In your circumstance, qmake in anaconda2 will be used, which causes problems.

          So easiest workaround might be to use the full path for qmake

          $ /usr/bin/qmake ../src

          If it doesn’t go well, please show me the result of followoing command

          $ which qmake

          Then I will be able to show you how to switch the different version of qmake in your circumstance.

          • Hi Kiyotaka,

            It works for me now. Thanks for your helping.

            Best,
            Po-Yu

          • Dear Po-Yu,

            Glad to know that the workaround works for you.

            Best regards,
            Kiyotaka

  12. Dear Frank and Kiyotoka,

    Thank you again Frank for the wonderful software, and thank you Kiyotoka for the installation instructions. I just compiled dsi_studio on my new Linux Mint 18.2 installation.
    The instructions were quite complete, except that I also needed to install the package libqt5opengl5-dev (error message: “qtOpenGL/QGLWidget: No such file or directory”).

    I thought I’d post this here to help the next person,

    Best regards,

    Steven

    • Dear Steven,

      Thank you for the feedback! I updated the article according to your suggestion.

      Best regards,
      Kiyotaka

  13. This is the developer of DSI Studio. Could I include you instruction on the DSI Studio website? I will acknowledge the source here. Thank you!

    • Dear Frank,

      Of course Yes! Thank you very much for developing such a wonderful software.
      I always build DSI-studio as I wrote in my post, so I hope it might help those who struggle building DSI studio for Ubuntu.

      Best regards,
      Kiyotaka

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